Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidate cytidylyltransferase | CSX01_06135 | Not Available | Positive | 1306913 - 1307716 | 29404.4 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | CSX01_06140 | Not Available | Positive | 1307785 - 1308933 | 41717.5 |
| rip metalloprotease rsep | CSX01_06145 | Not Available | Positive | 1308936 - 1309973 | 38211.1 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | CSX01_06150 | Not Available | Positive | 1309983 - 1311032 | 37037.5 |
| polc-type dna polymerase iii | CSX01_06155 | Not Available | Positive | 1311228 - 1315670 | 166889.0 |
| hypothetical protein | CSX01_06160 | Not Available | Positive | 1315695 - 1316708 | 37459.9 |
| prephenate dehydratase | CSX01_06165 | Not Available | Positive | 1316716 - 1317852 | 43184.3 |
| phosphatase | CSX01_06170 | Not Available | Positive | 1317873 - 1319390 | 57363.7 |
| polyphosphate kinase | CSX01_06175 | Not Available | Positive | 1319404 - 1321569 | 81999.0 |
| hypothetical protein | CSX01_06180 | Not Available | Positive | 1321550 - 1322383 | 31366.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
