Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX01_06085 | Not Available | Positive | 1299479 - 1299814 | 12717.6 |
| hypothetical protein | CSX01_06090 | Not Available | Positive | 1299828 - 1300556 | 27408.6 |
| hypothetical protein | CSX01_06095 | Not Available | Positive | 1300556 - 1301131 | 21095.1 |
| 30s ribosomal protein s2 | CSX01_06100 | Not Available | Positive | 1301277 - 1302014 | 27296.9 |
| elongation factor ts | CSX01_06105 | Not Available | Positive | 1302017 - 1302946 | 33640.2 |
| polysaccharide deacetylase | CSX01_06110 | Not Available | Positive | 1303174 - 1304061 | 33229.3 |
| cell shape determination protein ccma | CSX01_06115 | Not Available | Positive | 1304081 - 1304848 | 26403.8 |
| ump kinase | CSX01_06120 | Not Available | Positive | 1304878 - 1305573 | 25311.7 |
| ribosome recycling factor | CSX01_06125 | Not Available | Positive | 1305583 - 1306137 | 20978.2 |
| di-trans,poly-cis-decaprenylcistransferase | CSX01_06130 | Not Available | Positive | 1306209 - 1306907 | 26557.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
