Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan--trna ligase | CSX01_05885 | Not Available | Positive | 1260444 - 1261451 | 38111.6 |
| magnesium chelatase | CSX01_05890 | Not Available | Positive | 1261538 - 1263070 | 56933.2 |
| dna-protecting protein dpra | CSX01_05895 | Not Available | Positive | 1263067 - 1264161 | 41214.1 |
| dna topoisomerase i | CSX01_05900 | Not Available | Positive | 1264303 - 1266378 | 77658.0 |
| gtp-sensing pleiotropic transcriptional regulator cody | CSX01_05905 | Not Available | Positive | 1266553 - 1267329 | 28541.6 |
| flagellar basal body rod protein flgb | CSX01_05910 | Not Available | Positive | 1267589 - 1267984 | 15061.2 |
| flagellar basal body rod protein flgc | CSX01_05915 | Not Available | Positive | 1268012 - 1268467 | 16632.4 |
| flagellar hook-basal body complex protein flie | CSX01_05920 | Not Available | Positive | 1268489 - 1268791 | 10956.0 |
| flagellar biosynthesis protein | CSX01_05925 | Not Available | Positive | 1268830 - 1270440 | 59192.6 |
| flagellar motor switch protein flig | CSX01_05930 | Not Available | Positive | 1270444 - 1271451 | 37330.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
