Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coproporphyrinogen iii oxidase | CSX01_05785 | Not Available | Negative | 1233716 - 1234918 | 45621.7 |
| elongation factor 4 | CSX01_05790 | Not Available | Negative | 1234920 - 1236725 | 67249.2 |
| hypothetical protein | CSX01_05795 | Not Available | Positive | 1236932 - 1237756 | 31403.2 |
| ggdef domain-containing protein | CSX01_05800 | Not Available | Negative | 1237817 - 1239268 | 55596.0 |
| heat-inducible transcription repressor hrca | CSX01_05805 | Not Available | Positive | 1239545 - 1240591 | 38707.2 |
| nucleotide exchange factor grpe | CSX01_05810 | Not Available | Positive | 1240634 - 1241221 | 22284.2 |
| molecular chaperone dnak | CSX01_05815 | Not Available | Positive | 1241306 - 1243195 | 66792.7 |
| molecular chaperone dnaj | CSX01_05820 | Not Available | Positive | 1243374 - 1244540 | 41721.4 |
| glycosyl hydrolase | CSX01_05825 | Not Available | Positive | 1244722 - 1246869 | 79898.8 |
| glycoside hydrolase 43 family protein | CSX01_05830 | Not Available | Positive | 1246884 - 1248437 | 58277.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
