Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna internalization-related competence protein comec/rec2 | CSX01_05735 | Not Available | Positive | 1221689 - 1223971 | 84399.5 |
| hypothetical protein | CSX01_05740 | Not Available | Positive | 1224415 - 1225212 | 31356.6 |
| cys-trna(pro) deacylase | CSX01_05745 | Not Available | Positive | 1225338 - 1225811 | 17516.4 |
| serine/threonine protein kinase | CSX01_05750 | Not Available | Positive | 1225833 - 1226912 | 40536.4 |
| threonine--trna ligase | CSX01_05755 | Not Available | Positive | 1227275 - 1229041 | 67712.6 |
| rrna large subunit methyltransferase i | CSX01_05760 | Not Available | Positive | 1229053 - 1230264 | 45537.0 |
| hypothetical protein | CSX01_05765 | Not Available | Positive | 1230346 - 1231140 | 30267.0 |
| diguanylate cyclase | CSX01_05770 | Not Available | Negative | 1231207 - 1232172 | 36796.2 |
| 30s ribosomal protein s20 | CSX01_05775 | Not Available | Negative | 1232263 - 1232526 | 9554.8 |
| transcriptional regulator | CSX01_05780 | Not Available | Positive | 1232751 - 1233596 | 31144.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
