Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin | CSX01_05065 | Not Available | Negative | 1091600 - 1092070 | 17929.0 |
| hypothetical protein | CSX01_05070 | Not Available | Negative | 1092207 - 1092923 | 26753.3 |
| chromosome partitioning protein parb | CSX01_05085 | Not Available | Negative | 1094526 - 1095362 | 31609.2 |
| plasmid recombination protein | CSX01_05090 | Not Available | Negative | 1095371 - 1096336 | 37408.9 |
| atpase | CSX01_05095 | Not Available | Negative | 1096861 - 1097886 | 38818.4 |
| rna polymerase subunit sigma | CSX01_05100 | Not Available | Negative | 1098345 - 1098515 | 6863.07 |
| sigma-70 family rna polymerase sigma factor | CSX01_05105 | Not Available | Negative | 1098599 - 1099024 | 16613.0 |
| rna polymerase subunit sigma | CSX01_05110 | Not Available | Negative | 1099119 - 1099631 | 19770.8 |
| hypothetical protein | CSX01_05115 | Not Available | Negative | 1099625 - 1099825 | 7830.59 |
| conjugal transfer protein | CSX01_05125 | Not Available | Negative | 1100119 - 1100292 | 6726.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
