Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | strain JK626 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Bos, Metazoa, Ovis aries |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
964534 bp
Thymine Count
967011 bp
Guanine Count
613369 bp
Cytosine Count
602264 bp
Genome Length
3147178 bp
Protein-coding Genes
2882 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf327 domain-containing protein | CSX01_05015 | Not Available | Positive | 1084992 - 1085432 | 16950.3 |
| dna polymerase iii subunit delta' | CSX01_05020 | Not Available | Positive | 1085449 - 1086507 | 39682.5 |
| stage 0 sporulation protein | CSX01_05025 | Not Available | Positive | 1086504 - 1087382 | 33139.3 |
| sam-dependent methyltransferase | CSX01_05030 | Not Available | Positive | 1087382 - 1088122 | 27755.7 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | CSX01_05035 | Not Available | Positive | 1088150 - 1088989 | 31122.6 |
| divergent pap2 family protein | CSX01_05040 | Not Available | Positive | 1088999 - 1089457 | 16727.8 |
| nad-dependent protein deacylase | CSX01_05045 | Not Available | Positive | 1089485 - 1090243 | 28268.8 |
| 30s ribosomal protein s6 | CSX01_05050 | Not Available | Positive | 1090381 - 1090671 | 11127.2 |
| single-stranded dna-binding protein | CSX01_05055 | Not Available | Positive | 1090699 - 1091136 | 15774.2 |
| 30s ribosomal protein s18 | CSX01_05060 | Not Available | Positive | 1091180 - 1091434 | 9770.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
