Rhizobium tubonense strain CCBAU 85046

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Arminella

Description

Rhizobium tubonense strain CCBAU 85046 is a Gram-negative, rod-shaped bacterium characterized by its non-spore-forming nature and aerobic metabolism. This strain exhibits optimal growth at a temperature of 29.0°C, suggesting a preference for warm environments, which is typical for many soil-dwelling bacteria. As a member of the genus Rhizobium, this strain is likely involved in symbiotic relationships with legumes, facilitating nitrogen fixation, which is essential for soil fertility and plant growth. Its aerobic requirement indicates that R. tubonense strain CCBAU 85046 thrives in oxygen-rich environments, which is crucial for its metabolic processes. The specific adaptations of this strain to its ecological niche may enhance its effectiveness in promoting plant health and soil quality. The optimization of growth conditions, particularly temperature and oxygen levels, could provide insights into its potential applications in sustainable agriculture, particularly in enhancing crop yields through biological nitrogen fixation in leguminous crops. Understanding these traits further may contribute to advancements in microbial inoculant development for agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusArminella
SpeciesArminella tubonensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium tubonense strain CCBAU 85046

Accession NumberPCDP00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

6051 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Minor tail proteinCPY51_02255Not Available-449593 - 45048331541.9
Tail proteinCPY51_02260Not Available-450480 - 45112123045.5
hypothetical proteinCPY51_02265Not Available-451438 - 45308157112.5
Putative tail tape measure proteinCPY51_02270Not Available-453200 - 45377819378.9
hypothetical proteinCPY51_02275Not Available-453962 - 4541627490.11
hypothetical proteinCPY51_02280Not Available-454189 - 45455112558.0
Gene transfer aget (gta) orfg9-like phage major tail proteinCPY51_02285Not Available-454551 - 45495814295.0
Tail proteinCPY51_02290Not Available-455040 - 45544114353.3
Head closure proteinCPY51_02295Not Available-455548 - 45588312579.0
hypothetical proteinCPY51_02300Not Available-455886 - 45645520519.0

Displaying genes 1 – 10 of 6114 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

139 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da

Displaying 1–10 of 139 metabolites