Tenacibaculum dicentrarchi strain TDCHD05

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Tenacibaculum

Description

Tenacibaculum dicentrarchi strain TDCHD05 is a rod-shaped bacterium characterized by a single replicon. The strain is part of the Tenacibaculum genus, which is known for its relevance in marine environments, particularly in relation to fish pathogens. This strain is cataloged under the accession number OESZ00000000.1, which provides a unique identifier for genomic sequences related to this specific organism. The single replicon indicates a simplified genetic structure, which may influence its adaptability and survival in aquatic ecosystems. Ecologically, Tenacibaculum species, including T. dicentrarchi, are often associated with fish and can impact marine biodiversity. Their role as potential pathogens raises important considerations for aquaculture and marine health, particularly in managing diseases in fish populations. Understanding the characteristics of strains like TDCHD05 can be crucial for developing strategies to mitigate their effects in marine ecosystems and to ensure the health of commercially important fish species.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusTenacibaculum
SpeciesTenacibaculum dicentrarchi
Strainstrain TDCHD05

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Salmo salar, Dicentrarchus labrax, Genypterus chilensis
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tenacibaculum dicentrarchi strain TDCHD05 genome assembly, contig:

Gene Summary

Adenine Count

977499 bp

Thymine Count

982823 bp

Guanine Count

415041 bp

Cytosine Count

428670 bp

Genome Length

2804033 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
regulatory protein recxTDCHD05_30261Not AvailableNegative1673084 - 167359920590.1
copper transporterTDCHD05_30262Not AvailableNegative1673644 - 1677108128025.0
rnd transporterTDCHD05_30263Not AvailableNegative1677114 - 167833144417.3
transporterTDCHD05_30264Not AvailableNegative1678335 - 167966350071.3
tetr family transcriptional regulatorTDCHD05_30265Not AvailableNegative1679676 - 168036526814.0
polyprenyl synthetaseTDCHD05_30266Not AvailablePositive1680408 - 168137936726.9
Trna-metNot AvailableNot AvailablePositive1681429 - 1681505Not Available
site-specific recombinase, phage integrase familyTDCHD05_30267Not AvailablePositive1681688 - 168288447035.4
conserved hypothetical proteinTDCHD05_300001Not AvailablePositive1684190 - 168463616534.1
conserved hypothetical proteinTDCHD05_300002Not AvailablePositive1684636 - 168490810368.7

Displaying genes 1501 – 1510 of 2482 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
TenacibaculosisCausesPMC5793721

Displaying health effects 1 – 1 of 1 in total