Tenacibaculum dicentrarchi strain TDCHD05

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Tenacibaculum

Description

Tenacibaculum dicentrarchi strain TDCHD05 is a rod-shaped bacterium characterized by a single replicon. The strain is part of the Tenacibaculum genus, which is known for its relevance in marine environments, particularly in relation to fish pathogens. This strain is cataloged under the accession number OESZ00000000.1, which provides a unique identifier for genomic sequences related to this specific organism. The single replicon indicates a simplified genetic structure, which may influence its adaptability and survival in aquatic ecosystems. Ecologically, Tenacibaculum species, including T. dicentrarchi, are often associated with fish and can impact marine biodiversity. Their role as potential pathogens raises important considerations for aquaculture and marine health, particularly in managing diseases in fish populations. Understanding the characteristics of strains like TDCHD05 can be crucial for developing strategies to mitigate their effects in marine ecosystems and to ensure the health of commercially important fish species.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusTenacibaculum
SpeciesTenacibaculum dicentrarchi
Strainstrain TDCHD05

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Salmo salar, Dicentrarchus labrax, Genypterus chilensis
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Tenacibaculum dicentrarchi strain TDCHD05 genome assembly, contig:

Gene Summary

Adenine Count

977499 bp

Thymine Count

982823 bp

Guanine Count

415041 bp

Cytosine Count

428670 bp

Genome Length

2804033 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
coproporphyrinogen iii oxidaseTDCHD05_30163Not AvailableNegative1569806 - 157092142290.2
conserved hypothetical proteinTDCHD05_30164Not AvailableNegative1570923 - 157307685243.1
crossover junction endodeoxyribonuclease ruvcTDCHD05_30165Not AvailableNegative1573084 - 157363820325.3
adenine deaminaseTDCHD05_30166Not AvailableNegative1573692 - 157531459082.2
phosphoenolpyruvate carboxykinase (atp)TDCHD05_30167Not AvailableNegative1575410 - 157701159123.6
conserved membrane hypothetical proteinTDCHD05_30168Not AvailableNegative1577095 - 157748114362.0
saccharopine dehydrogenaseTDCHD05_30169Not AvailablePositive1577559 - 157892951645.1
conserved exported hypothetical proteinTDCHD05_30170Not AvailablePositive1579068 - 157970624321.4
radical sam proteinTDCHD05_30171Not AvailableNegative1579970 - 158185371729.9
streptopain family cystein protease precursorTDCHD05_30172Not AvailablePositive1582095 - 158335147766.6

Displaying genes 1401 – 1410 of 2482 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
TenacibaculosisCausesPMC5793721

Displaying health effects 1 – 1 of 1 in total