Fibrobacter sp. UWT3

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Fibrobacterota

Class

Fibrobacteria

Order

Fibrobacterales

Family

Fibrobacteraceae

Genus

Fibrobacter

Description

Fibrobacter sp. UWT3 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This organism has a single replicon, indicating that it possesses a singular circular chromosome, a common characteristic in many bacterial species. The genetic sequence of Fibrobacter sp. UWT3 is cataloged under the accession number OCSS00000000.1. The classification of Fibrobacter sp. UWT3 within the Fibrobacter genus indicates a potential role in the degradation of plant materials, particularly cellulose. Members of this genus are often associated with environments rich in plant biomass, such as the rumen of herbivores, where they contribute significantly to the breakdown of complex carbohydrates. The ability to move via flagella may enhance its capacity to navigate through the microbial communities found in such environments, facilitating its role in the degradation process. Understanding the traits of Fibrobacter sp. UWT3 can provide insights into its ecological role in nutrient cycling, particularly in environments where plant material is abundant. Its motility and ability to degrade cellulose may contribute to the overall efficiency of biomass conversion in ecosystems, playing a crucial part in the food web dynamics and energy flow.

Taxonomy

KingdomPseudomonadati
PhylumFibrobacterota
ClassFibrobacteria
OrderFibrobacterales
FamilyFibrobacteraceae
GenusFibrobacter
SpeciesFibrobacter sp. UWT3
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Fibrobacter sp. UWT3
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fibrobacter sp. UWT3 genome assembly, contig: Ga0136298_15, whole

Gene Summary

Adenine Count

882259 bp

Thymine Count

877451 bp

Guanine Count

1027793 bp

Cytosine Count

1022940 bp

Genome Length

3810443 bp

Protein-coding Genes

3138 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dtdp-glucose 4,6-dehydrataseSAMN05720781_0154Not AvailablePositive189567 - 19070043502.5
dtdp-4-dehydrorhamnose 3,5-epimeraseSAMN05720781_0155Not AvailablePositive190708 - 19127121015.2
protein-tyrosine phosphataseSAMN05720781_0156Not AvailablePositive191336 - 19177916781.3
polysaccharide export outer membrane proteinSAMN05720781_0157Not AvailablePositive191779 - 19292140805.0
mannose-1-phosphate guanylyltransferaseSAMN05720781_0158Not AvailablePositive192928 - 19430750926.2
phenylalanyl-trna synthetase, alpha subunitSAMN05720781_0159Not AvailableNegative194468 - 19549037821.9
acetyltransferase (gnat) family proteinSAMN05720781_0160Not AvailableNegative195487 - 19613724922.8
hypothetical proteinSAMN05720781_0161Not AvailableNegative196142 - 19667519416.3
protein of unknown functionSAMN05720781_0162Not AvailablePositive196915 - 19885866091.7
antitoxin component ywqk of the ywqjk toxin-antitoxin moduleSAMN05720781_0163Not AvailableNegative198861 - 20030355193.5

Displaying genes 221 – 230 of 1784 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.