Fibrobacter sp. UWT3

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Fibrobacterota

Class

Fibrobacteria

Order

Fibrobacterales

Family

Fibrobacteraceae

Genus

Fibrobacter

Description

Fibrobacter sp. UWT3 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This organism has a single replicon, indicating that it possesses a singular circular chromosome, a common characteristic in many bacterial species. The genetic sequence of Fibrobacter sp. UWT3 is cataloged under the accession number OCSS00000000.1. The classification of Fibrobacter sp. UWT3 within the Fibrobacter genus indicates a potential role in the degradation of plant materials, particularly cellulose. Members of this genus are often associated with environments rich in plant biomass, such as the rumen of herbivores, where they contribute significantly to the breakdown of complex carbohydrates. The ability to move via flagella may enhance its capacity to navigate through the microbial communities found in such environments, facilitating its role in the degradation process. Understanding the traits of Fibrobacter sp. UWT3 can provide insights into its ecological role in nutrient cycling, particularly in environments where plant material is abundant. Its motility and ability to degrade cellulose may contribute to the overall efficiency of biomass conversion in ecosystems, playing a crucial part in the food web dynamics and energy flow.

Taxonomy

KingdomPseudomonadati
PhylumFibrobacterota
ClassFibrobacteria
OrderFibrobacterales
FamilyFibrobacteraceae
GenusFibrobacter
SpeciesFibrobacter sp. UWT3
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Fibrobacter sp. UWT3
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Fibrobacter sp. UWT3 genome assembly, contig: Ga0136298_15, whole

Gene Summary

Adenine Count

882259 bp

Thymine Count

877451 bp

Guanine Count

1027793 bp

Cytosine Count

1022940 bp

Genome Length

3810443 bp

Protein-coding Genes

3138 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
endoglucanaseSAMN05720781_1121Not AvailableNegative1319648 - 132096447642.4
diguanylate cyclase (ggdef) domain-containing proteinSAMN05720781_1122Not AvailablePositive1321180 - 132231343222.4
diguanylate cyclase (ggdef) domain-containing proteinSAMN05720781_1123Not AvailablePositive1322310 - 132344342690.4
anti-sigma regulatory factor (ser/thr protein kinase)SAMN05720781_1124Not AvailablePositive1323495 - 132390815227.4
anti-sigma b factor antagonistSAMN05720781_1125Not AvailablePositive1323941 - 132423710895.4
hydroxymethylpyrimidine synthaseSAMN05720781_1126Not AvailableNegative1324505 - 132621763795.0
dihydroxyacid dehydrataseSAMN05720781_1127Not AvailableNegative1326290 - 132814966066.2
conserved hypothetical protein (putative transposase or invertase)SAMN05720781_1128Not AvailablePositive1328382 - 132929334487.3
transposaseSAMN05720781_1129Not AvailablePositive1329454 - 132978312881.6
transposase inso and inactivated derivativesSAMN05720781_1130Not AvailablePositive1329801 - 133064932940.8

Displaying genes 1171 – 1180 of 1784 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.