Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ig-like domain (group 3) | SAMN02910411_1558 | Not Available | Negative | 1025147 - 1028512 | 122285.0 |
| mth538 tir-like domain | SAMN02910411_1559 | Not Available | Negative | 1028821 - 1031829 | 113275.0 |
| dna replication and repair protein recr | SAMN02910411_1560 | Not Available | Negative | 1031853 - 1032452 | 21888.4 |
| hypothetical protein | SAMN02910411_1561 | Not Available | Negative | 1032456 - 1032797 | 11817.2 |
| dna polymerase-3 subunit gamma/tau | SAMN02910411_1562 | Not Available | Negative | 1032813 - 1034402 | 58835.2 |
| 6-phosphofructokinase 1 | SAMN02910411_1563 | Not Available | Negative | 1034436 - 1035509 | 38875.2 |
| dipeptidase d | SAMN02910411_1564 | Not Available | Negative | 1035542 - 1036978 | 52001.2 |
| tocopherol cyclase | SAMN02910411_1565 | Not Available | Negative | 1036999 - 1038258 | 47829.1 |
| transcription elongation factor grea | SAMN02910411_1566 | Not Available | Negative | 1038276 - 1038779 | 19117.5 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase | SAMN02910411_1567 | Not Available | Negative | 1038913 - 1040445 | 56763.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
