Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910411_1498 | Not Available | Negative | 957786 - 958778 | 37789.1 |
| rhomboid protease glup | SAMN02910411_1499 | Not Available | Negative | 958782 - 959453 | 24714.7 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN02910411_1500 | Not Available | Negative | 959456 - 960349 | 32522.6 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | SAMN02910411_1501 | Not Available | Negative | 960336 - 961808 | 54237.2 |
| diaminopimelate epimerase | SAMN02910411_1502 | Not Available | Negative | 961811 - 962644 | 30557.2 |
| arac-type dna-binding protein | SAMN02910411_1503 | Not Available | Positive | 962800 - 963657 | 32383.2 |
| nitroreductase family | SAMN02910411_1504 | Not Available | Negative | 963662 - 964471 | 30499.2 |
| predicted nuclease of the rnase h fold, hicb family | SAMN02910411_1505 | Not Available | Negative | 964805 - 965158 | 13395.0 |
| hypothetical protein | SAMN02910411_1506 | Not Available | Negative | 965165 - 965425 | 10038.3 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN02910411_1507 | Not Available | Negative | 965508 - 966302 | 29787.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
