Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hdig domain-containing protein | SAMN02910411_1418 | Not Available | Positive | 870560 - 871693 | 41931.4 |
| exodeoxyribonuclease v alpha subunit | SAMN02910411_1419 | Not Available | Negative | 871683 - 873914 | 83109.9 |
| hypothetical protein | SAMN02910411_1420 | Not Available | Negative | 873968 - 874426 | 16728.2 |
| flagellar basal-body rod protein flgg | SAMN02910411_1421 | Not Available | Negative | 874517 - 875335 | 29353.8 |
| flagellar basal-body rod protein flgg | SAMN02910411_1422 | Not Available | Negative | 875356 - 876162 | 29226.9 |
| rod shape-determining protein mreb | SAMN02910411_1423 | Not Available | Negative | 876312 - 877295 | 34677.1 |
| excinuclease abc subunit a | SAMN02910411_1424 | Not Available | Negative | 877598 - 880420 | 104587.0 |
| excinuclease abc subunit b | SAMN02910411_1425 | Not Available | Negative | 880475 - 882463 | 76157.7 |
| hypothetical protein | SAMN02910411_1426 | Not Available | Positive | 883323 - 884117 | 30374.1 |
| uncharacterized membrane protein yesl | SAMN02910411_1427 | Not Available | Negative | 884207 - 884833 | 24002.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
