Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal 50s subunit-recycling heat shock protein, contains s4 domain | SAMN02910411_1408 | Not Available | Negative | 859287 - 859526 | 8825.78 |
| dna-binding protein hu-beta | SAMN02910411_1409 | Not Available | Negative | 859601 - 859873 | 9577.59 |
| hypothetical protein | SAMN02910411_1410 | Not Available | Negative | 860102 - 861346 | 45551.8 |
| trna nucleotidyltransferase (cca-adding enzyme) | SAMN02910411_1411 | Not Available | Negative | 861351 - 862676 | 50070.1 |
| prolyl-trna synthetase | SAMN02910411_1412 | Not Available | Negative | 862678 - 864117 | 54615.3 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910411_1413 | Not Available | Negative | 864247 - 866535 | 88657.8 |
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN02910411_1414 | Not Available | Negative | 866556 - 867212 | 24447.2 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN02910411_1415 | Not Available | Negative | 867292 - 867981 | 26213.6 |
| hamp domain-containing protein | SAMN02910411_1416 | Not Available | Negative | 867981 - 869129 | 43210.2 |
| methionine adenosyltransferase | SAMN02910411_1417 | Not Available | Negative | 869195 - 870376 | 42633.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
