Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division inhibitor sepf | SAMN02910411_0670 | Not Available | Positive | 79680 - 80192 | 19153.6 |
| 3-dehydroquinate synthase | SAMN02910411_0671 | Not Available | Positive | 80270 - 81361 | 40134.2 |
| signal peptidase ii | SAMN02910411_0672 | Not Available | Positive | 81361 - 81891 | 20173.5 |
| ribosomal large subunit pseudouridine synthase d | SAMN02910411_0673 | Not Available | Positive | 81884 - 82798 | 34047.9 |
| site-specific recombinase xerd | SAMN02910411_0674 | Not Available | Negative | 82818 - 83882 | 40768.5 |
| radical sam mobile pair protein b | SAMN02910411_0675 | Not Available | Negative | 84228 - 85151 | 35378.1 |
| radical sam mobile pair protein a | SAMN02910411_0676 | Not Available | Negative | 85127 - 85825 | 27311.9 |
| cupin domain-containing protein | SAMN02910411_0677 | Not Available | Negative | 85891 - 86244 | 12553.6 |
| rrf2 family protein | SAMN02910411_0678 | Not Available | Negative | 86336 - 86770 | 16363.8 |
| acetyltransferase (gnat) family protein | SAMN02910411_0680 | Not Available | Negative | 87392 - 87835 | 16616.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
