Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein mrec | SAMN02910411_0660 | Not Available | Positive | 69551 - 70414 | 31419.0 |
| rod shape-determining protein mred | SAMN02910411_0661 | Not Available | Positive | 70407 - 70952 | 20809.2 |
| penicillin-binding protein 2 | SAMN02910411_0662 | Not Available | Positive | 70939 - 73782 | 104945.0 |
| septum site-determining protein minc | SAMN02910411_0663 | Not Available | Positive | 73815 - 74498 | 25129.4 |
| rod shape determining protein roda | SAMN02910411_0664 | Not Available | Positive | 74498 - 75613 | 40753.2 |
| methylglyoxal synthase | SAMN02910411_0665 | Not Available | Positive | 75614 - 76009 | 14646.7 |
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | SAMN02910411_0666 | Not Available | Positive | 75984 - 76973 | 35222.3 |
| hypothetical protein | SAMN02910411_0667 | Not Available | Positive | 77052 - 77474 | 15621.8 |
| hypothetical protein | SAMN02910411_0668 | Not Available | Positive | 77504 - 78922 | 53849.6 |
| hypothetical protein | SAMN02910411_0669 | Not Available | Positive | 78958 - 79662 | 26322.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
