Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sporulation-specific sigma factor | SAMN02910411_1235 | Not Available | Positive | 664467 - 665057 | 22503.7 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN02910411_1236 | Not Available | Negative | 665054 - 666067 | 37958.6 |
| c4-dicarboxylate transporter, dctm subunit | SAMN02910411_1237 | Not Available | Negative | 666088 - 667377 | 45479.2 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN02910411_1238 | Not Available | Negative | 667380 - 668018 | 24794.5 |
| 3-dehydroquinate dehydratase | SAMN02910411_1239 | Not Available | Negative | 668178 - 668939 | 26897.2 |
| major facilitator superfamily protein | SAMN02910411_1240 | Not Available | Negative | 668956 - 670161 | 42441.4 |
| shikimate dehydrogenase | SAMN02910411_1241 | Not Available | Negative | 670178 - 671053 | 31842.5 |
| dna-binding transcriptional regulator, lysr family | SAMN02910411_1242 | Not Available | Positive | 671267 - 672151 | 33204.0 |
| 2,4-dienoyl-coa reductase | SAMN02910411_1243 | Not Available | Positive | 672288 - 674288 | 73938.6 |
| shikimate kinase | SAMN02910411_1244 | Not Available | Positive | 674413 - 675198 | 30078.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
