Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage shock protein c (pspc) family protein | SAMN02910411_1195 | Not Available | Negative | 623064 - 623261 | 6956.61 |
| helix-turn-helix domain-containing protein | SAMN02910411_1196 | Not Available | Positive | 623426 - 623920 | 18550.2 |
| thioredoxin | SAMN02910411_1197 | Not Available | Positive | 624037 - 624354 | 11722.2 |
| nitt/taut family transport system atp-binding protein | SAMN02910411_1198 | Not Available | Positive | 624515 - 625108 | 22104.8 |
| hypothetical protein | SAMN02910411_1199 | Not Available | Positive | 625184 - 626005 | 31720.8 |
| hypothetical protein | SAMN02910411_1200 | Not Available | Positive | 625983 - 626792 | 30944.4 |
| lsu ribosomal protein l25p | SAMN02910411_1201 | Not Available | Positive | 626914 - 627498 | 21805.9 |
| predicted n-acetyltransferase yhbs | SAMN02910411_1202 | Not Available | Positive | 627651 - 628277 | 23930.5 |
| ntp pyrophosphatase, house-cleaning of non-canonical ntps | SAMN02910411_1203 | Not Available | Positive | 628429 - 628749 | 12486.6 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN02910411_1204 | Not Available | Positive | 628848 - 629786 | 33318.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
