Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tm2 domain-containing protein | SAMN02910411_1124 | Not Available | Positive | 561744 - 561971 | 8439.32 |
| ribonuclease-3 | SAMN02910411_1125 | Not Available | Positive | 562304 - 563425 | 43378.8 |
| hypothetical protein | SAMN02910411_1126 | Not Available | Positive | 563428 - 563628 | 8593.22 |
| transcriptional regulator, contains xre-family hth domain | SAMN02910411_1127 | Not Available | Positive | 563735 - 564076 | 12669.2 |
| hypothetical protein | SAMN02910411_1128 | Not Available | Positive | 564201 - 564737 | 21194.2 |
| sigma-70, region 4 | SAMN02910411_1129 | Not Available | Positive | 565423 - 565968 | 20970.1 |
| mrna interferase mazf | SAMN02910411_1130 | Not Available | Positive | 566435 - 566845 | 15405.9 |
| hypothetical protein | SAMN02910411_1131 | Not Available | Positive | 566797 - 566970 | 6512.08 |
| site-specific dna recombinase | SAMN02910411_1132 | Not Available | Positive | 567023 - 568711 | 65250.3 |
| predicted membrane protein | SAMN02910411_1133 | Not Available | Positive | 569570 - 569968 | 14687.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
