Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein vird4 | SAMN02910411_1093 | Not Available | Positive | 533512 - 535257 | 65921.6 |
| crcb protein | SAMN02910411_1094 | Not Available | Positive | 535384 - 535752 | 12828.1 |
| hypothetical protein | SAMN02910411_1096 | Not Available | Positive | 536450 - 536914 | 17968.8 |
| maff2 family protein | SAMN02910411_1097 | Not Available | Positive | 537143 - 537400 | 8812.22 |
| hypothetical protein | SAMN02910411_1098 | Not Available | Positive | 537493 - 538359 | 31853.6 |
| type iv secretory pathway, virb4 component | SAMN02910411_1099 | Not Available | Positive | 538372 - 540885 | 96144.7 |
| cell wall-associated hydrolase, nlpc family | SAMN02910411_1100 | Not Available | Positive | 540886 - 542199 | 50002.4 |
| protein of unknown function | SAMN02910411_1101 | Not Available | Positive | 542209 - 542469 | 9861.54 |
| protein of unknown function | SAMN02910411_1102 | Not Available | Positive | 542459 - 543109 | 23682.3 |
| hypothetical protein | SAMN02910411_1103 | Not Available | Positive | 543112 - 543252 | 5399.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
