Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910411_1043 | Not Available | Positive | 464293 - 464931 | 23869.4 |
| manganese-dependent inorganic pyrophosphatase | SAMN02910411_1044 | Not Available | Positive | 464953 - 466596 | 60796.2 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN02910411_1045 | Not Available | Positive | 466629 - 468575 | 74980.4 |
| transcription termination factor rho | SAMN02910411_1046 | Not Available | Positive | 468693 - 470111 | 53058.1 |
| malate dehydrogenase (oxaloacetate-decarboxylating) | SAMN02910411_1047 | Not Available | Positive | 470139 - 471290 | 40628.2 |
| protein of unknown function | SAMN02910411_1048 | Not Available | Positive | 471326 - 471841 | 19426.9 |
| signal transduction histidine kinase | SAMN02910411_1049 | Not Available | Positive | 471866 - 473827 | 73209.5 |
| response regulator receiver domain-containing protein | SAMN02910411_1050 | Not Available | Positive | 473827 - 474675 | 32209.8 |
| lsu ribosomal protein l31p | SAMN02910411_1051 | Not Available | Positive | 474812 - 475018 | 7673.09 |
| uncharacterized conserved protein yqhq | SAMN02910411_1052 | Not Available | Positive | 475085 - 476014 | 34976.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
