Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| h+/cl- antiporter clca | SAMN02910411_0991 | Not Available | Positive | 403890 - 405167 | 45785.3 |
| methyl-accepting chemotaxis protein | SAMN02910411_0993 | Not Available | Positive | 405483 - 407222 | 63156.9 |
| integrase core domain-containing protein | SAMN02910411_0994 | Not Available | Negative | 407281 - 407561 | 11166.2 |
| orotate phosphoribosyltransferase | SAMN02910411_0996 | Not Available | Negative | 408134 - 408778 | 23457.1 |
| methyl-accepting chemotaxis protein | SAMN02910411_0997 | Not Available | Positive | 409018 - 411030 | 71260.4 |
| predicted phospholipase, patatin/cpla2 family | SAMN02910411_0998 | Not Available | Negative | 411060 - 411920 | 32504.3 |
| beta-glucosidase | SAMN02910411_0999 | Not Available | Positive | 412097 - 414910 | 103398.0 |
| hypothetical protein | SAMN02910411_1000 | Not Available | Positive | 414928 - 416010 | 36961.6 |
| hydrogenase nickel incorporation protein hypa/hybf | SAMN02910411_1001 | Not Available | Positive | 416124 - 416465 | 12808.4 |
| formate/nitrite transporter | SAMN02910411_1002 | Not Available | Positive | 416488 - 417321 | 28963.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
