Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910411_0961 | Not Available | Negative | 370948 - 371589 | 24260.4 |
| hypothetical protein | SAMN02910411_0962 | Not Available | Negative | 371977 - 372159 | 6881.8 |
| homoserine o-succinyltransferase | SAMN02910411_0963 | Not Available | Negative | 372672 - 373595 | 35934.5 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910411_0964 | Not Available | Negative | 373664 - 375343 | 63597.1 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910411_0965 | Not Available | Negative | 375336 - 377051 | 65561.7 |
| dna ligase (nad+) | SAMN02910411_0966 | Not Available | Negative | 377104 - 379107 | 73805.0 |
| 23s rrna pseudouridine2604 synthase | SAMN02910411_0967 | Not Available | Negative | 379125 - 379847 | 27395.3 |
| sh3 domain-containing protein | SAMN02910411_0968 | Not Available | Negative | 379923 - 381182 | 45940.5 |
| Trna-arg | Not Available | Not Available | Positive | 381218 - 381291 | Not Available |
| shikimate dehydrogenase | SAMN02910411_0970 | Not Available | Positive | 381420 - 382274 | 30853.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
