Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin | SAMN02910411_0921 | Not Available | Negative | 325765 - 326247 | 17784.5 |
| conserved hypothetical protein (putative transposase or invertase) | SAMN02910411_0922 | Not Available | Negative | 326346 - 327224 | 33683.3 |
| isopentenyldiphosphate isomerase | SAMN02910411_0923 | Not Available | Negative | 327332 - 328072 | 27492.4 |
| transcriptional regulator, spx/mgsr family | SAMN02910411_0924 | Not Available | Negative | 328074 - 328415 | 12866.5 |
| na+-driven multidrug efflux pump | SAMN02910411_0925 | Not Available | Negative | 328552 - 329865 | 49207.5 |
| kap family p-loop domain-containing protein | SAMN02910411_0926 | Not Available | Negative | 329913 - 332300 | 92486.8 |
| hypothetical protein | SAMN02910411_0927 | Not Available | Negative | 332606 - 332920 | 11168.9 |
| pyridoxamine 5'-phosphate oxidase | SAMN02910411_0928 | Not Available | Negative | 333003 - 333509 | 18703.4 |
| transcriptional regulator, spx/mgsr family | SAMN02910411_0929 | Not Available | Negative | 333572 - 333913 | 12852.6 |
| aipr protein | SAMN02910411_0930 | Not Available | Negative | 333947 - 335944 | 76717.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
