Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, argr family | SAMN02910411_0881 | Not Available | Negative | 290149 - 290601 | 16619.3 |
| nad+ kinase | SAMN02910411_0882 | Not Available | Negative | 290602 - 291447 | 31074.2 |
| 23s rrna (cytidine1920-2'-o)/16s rrna (cytidine1409-2'-o)-methyltransferase | SAMN02910411_0883 | Not Available | Negative | 291447 - 292244 | 29168.2 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN02910411_0884 | Not Available | Negative | 292246 - 294105 | 68174.4 |
| geranylgeranyl diphosphate synthase, type ii | SAMN02910411_0885 | Not Available | Negative | 294114 - 295007 | 32663.1 |
| exodeoxyribonuclease vii small subunit | SAMN02910411_0886 | Not Available | Negative | 295009 - 295239 | 8500.97 |
| exodeoxyribonuclease vii large subunit | SAMN02910411_0887 | Not Available | Negative | 295248 - 296456 | 44411.0 |
| nusb antitermination factor | SAMN02910411_0888 | Not Available | Negative | 296456 - 296878 | 15625.5 |
| uncharacterized conserved protein ylou, alkaline shock protein (asp23) family | SAMN02910411_0889 | Not Available | Negative | 296986 - 297363 | 12916.6 |
| 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase | SAMN02910411_0890 | Not Available | Negative | 297405 - 298124 | 25828.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
