Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate lyase | SAMN02910411_0871 | Not Available | Negative | 281217 - 282617 | 52103.6 |
| hypothetical protein | SAMN02910411_0872 | Not Available | Negative | 282620 - 283267 | 25630.3 |
| hypothetical protein | SAMN02910411_0873 | Not Available | Negative | 283242 - 283607 | 13338.2 |
| Trna-thr | Not Available | Not Available | Positive | 283766 - 283838 | Not Available |
| spermidine/putrescine transport system atp-binding protein | SAMN02910411_0875 | Not Available | Positive | 283902 - 284969 | 40018.2 |
| spermidine/putrescine transport system permease protein | SAMN02910411_0876 | Not Available | Positive | 284962 - 285789 | 30177.2 |
| spermidine/putrescine transport system permease protein | SAMN02910411_0877 | Not Available | Positive | 285786 - 286574 | 28958.2 |
| spermidine/putrescine transport system substrate-binding protein | SAMN02910411_0878 | Not Available | Positive | 286571 - 287638 | 41018.2 |
| hypothetical protein | SAMN02910411_0879 | Not Available | Negative | 287635 - 288315 | 25828.3 |
| dna repair protein recn (recombination protein n) | SAMN02910411_0880 | Not Available | Negative | 288412 - 290091 | 62194.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
