Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3'-5' exoribonuclease | SAMN02910411_0580 | Not Available | Positive | 3005722 - 3006672 | 35621.2 |
| 23s rrna (uracil1939-c5)-methyltransferase | SAMN02910411_0581 | Not Available | Positive | 3006672 - 3008057 | 50957.5 |
| hypothetical protein | SAMN02910411_0582 | Not Available | Positive | 3008165 - 3008290 | 4864.18 |
| uncharacterized protein, pyridoxamine 5'-phosphate oxidase (pnpox-like) family | SAMN02910411_0583 | Not Available | Negative | 3008322 - 3008714 | 14777.5 |
| caax protease self-immunity | SAMN02910411_0584 | Not Available | Negative | 3008782 - 3009510 | 28124.5 |
| hypothetical protein | SAMN02910411_0585 | Not Available | Positive | 3009684 - 3010871 | 44084.9 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN02910411_0586 | Not Available | Positive | 3011066 - 3011767 | 25869.4 |
| signal transduction histidine kinase | SAMN02910411_0587 | Not Available | Positive | 3011786 - 3014353 | 97609.8 |
| hypothetical protein | SAMN02910411_0588 | Not Available | Positive | 3014426 - 3015061 | 22926.7 |
| hypothetical protein | SAMN02910411_0589 | Not Available | Positive | 3015149 - 3015757 | 23170.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
