Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein (mcp) signalling domain-containing protein | SAMN02910411_0861 | Not Available | Negative | 266298 - 268154 | 66612.3 |
| gggtgrt protein | SAMN02910411_0862 | Not Available | Negative | 268330 - 269340 | 35725.7 |
| nifu homolog involved in fe-s cluster formation | SAMN02910411_0863 | Not Available | Negative | 269362 - 270054 | 24834.7 |
| uncharacterized protein | SAMN02910411_0864 | Not Available | Negative | 270214 - 270966 | 27589.3 |
| hypothetical protein | SAMN02910411_0865 | Not Available | Negative | 270953 - 272605 | 61353.9 |
| membrane protease subunit, stomatin/prohibitin family, contains c-terminal zn-ribbon domain | SAMN02910411_0866 | Not Available | Negative | 272621 - 273787 | 41185.8 |
| hypothetical protein | SAMN02910411_0867 | Not Available | Negative | 273881 - 274549 | 24441.2 |
| dna topoisomerase-3 | SAMN02910411_0868 | Not Available | Negative | 274573 - 278382 | 141784.0 |
| hypothetical protein | SAMN02910411_0869 | Not Available | Negative | 278471 - 279829 | 51628.5 |
| aspartate-semialdehyde dehydrogenase | SAMN02910411_0870 | Not Available | Negative | 280004 - 281089 | 40254.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
