Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinamidase-related amidase | SAMN02910411_0426 | Not Available | Positive | 2862807 - 2863259 | 17235.7 |
| dna polymerase-3 subunit epsilon | SAMN02910411_0427 | Not Available | Negative | 2863280 - 2863819 | 20583.7 |
| hypothetical protein | SAMN02910411_0428 | Not Available | Negative | 2863848 - 2864186 | 13215.3 |
| putative sos response-associated peptidase yedk | SAMN02910411_0429 | Not Available | Negative | 2864146 - 2864772 | 23898.8 |
| hypothetical protein | SAMN02910411_0430 | Not Available | Negative | 2864783 - 2865010 | 8755.17 |
| dna polymerase v | SAMN02910411_0431 | Not Available | Negative | 2865049 - 2865447 | 14880.8 |
| transposase | SAMN02910411_0433 | Not Available | Negative | 2865448 - 2865751 | 11828.2 |
| methyl-accepting chemotaxis protein | SAMN02910411_0434 | Not Available | Negative | 2865839 - 2867890 | 73160.1 |
| cysteine-rich small domain-containing protein | SAMN02910411_0435 | Not Available | Negative | 2868000 - 2868239 | 9459.24 |
| hypothetical protein | SAMN02910411_0436 | Not Available | Positive | 2868364 - 2868525 | 6076.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
