Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s18 acetylase rimi | SAMN02910411_0416 | Not Available | Negative | 2855762 - 2856319 | 20834.1 |
| hypothetical protein | SAMN02910411_0417 | Not Available | Positive | 2856469 - 2856954 | 18881.4 |
| hypothetical protein | SAMN02910411_0418 | Not Available | Negative | 2857053 - 2857883 | 30771.9 |
| hypothetical protein | SAMN02910411_0419 | Not Available | Positive | 2858582 - 2859418 | 31088.7 |
| nitroreductase | SAMN02910411_0420 | Not Available | Positive | 2859651 - 2860157 | 18984.8 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN02910411_0421 | Not Available | Positive | 2860273 - 2861271 | 38734.4 |
| hdig domain-containing protein | SAMN02910411_0422 | Not Available | Positive | 2861276 - 2861866 | 22308.4 |
| hypothetical protein | SAMN02910411_0423 | Not Available | Positive | 2861891 - 2862100 | 8185.63 |
| thioredoxin | SAMN02910411_0424 | Not Available | Positive | 2862103 - 2862426 | 12152.6 |
| rhodanese-related sulfurtransferase | SAMN02910411_0425 | Not Available | Positive | 2862443 - 2862772 | 11821.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
