Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate dehydrogenase | SAMN02910411_0294 | Not Available | Positive | 2739220 - 2740146 | 33154.9 |
| upf0042 nucleotide-binding protein | SAMN02910411_0295 | Not Available | Positive | 2740143 - 2741015 | 33181.9 |
| hypothetical protein | SAMN02910411_0296 | Not Available | Positive | 2741079 - 2741858 | 28747.0 |
| catabolite repression hpr-like protein | SAMN02910411_0297 | Not Available | Positive | 2741901 - 2742149 | 8958.86 |
| lipid kinase, yegs/rv2252/bmru family | SAMN02910411_0298 | Not Available | Positive | 2742168 - 2743061 | 32557.9 |
| fructose-bisphosphate aldolase, class ii | SAMN02910411_0299 | Not Available | Positive | 2743138 - 2744001 | 30389.7 |
| glutamine synthetase | SAMN02910411_0300 | Not Available | Positive | 2744109 - 2746229 | 78689.9 |
| penicillin-binding protein 1a | SAMN02910411_0301 | Not Available | Negative | 2746289 - 2748880 | 93440.8 |
| uncharacterized protein, yigz family | SAMN02910411_0302 | Not Available | Positive | 2748936 - 2749589 | 24322.9 |
| Trna-gln | Not Available | Not Available | Positive | 2749691 - 2749765 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
