Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secy/sec61 alpha | SAMN02910411_0274 | Not Available | Positive | 2720477 - 2721793 | 47709.5 |
| adenylate kinase | SAMN02910411_0275 | Not Available | Positive | 2721895 - 2722539 | 23417.2 |
| methionine aminopeptidase, type i | SAMN02910411_0276 | Not Available | Positive | 2722541 - 2723341 | 29230.7 |
| hypothetical protein | SAMN02910411_0277 | Not Available | Positive | 2723332 - 2723598 | 10241.7 |
| translation initiation factor if-1 | SAMN02910411_0278 | Not Available | Positive | 2723591 - 2723809 | 8219.13 |
| large subunit ribosomal protein l36 | SAMN02910411_0279 | Not Available | Positive | 2723936 - 2724049 | 4325.57 |
| small subunit ribosomal protein s13 | SAMN02910411_0280 | Not Available | Positive | 2724254 - 2724622 | 13714.8 |
| small subunit ribosomal protein s11 | SAMN02910411_0281 | Not Available | Positive | 2724658 - 2725050 | 13752.7 |
| small subunit ribosomal protein s4 | SAMN02910411_0282 | Not Available | Positive | 2725067 - 2725660 | 22832.7 |
| dna-directed rna polymerase subunit alpha | SAMN02910411_0283 | Not Available | Positive | 2725835 - 2726794 | 35184.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
