Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter nhac | SAMN02910411_0244 | Not Available | Positive | 2699246 - 2700781 | 54377.7 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | SAMN02910411_0245 | Not Available | Positive | 2700825 - 2701301 | 17246.7 |
| trax protein | SAMN02910411_0246 | Not Available | Positive | 2701301 - 2702065 | 28904.4 |
| uracil permease | SAMN02910411_0247 | Not Available | Positive | 2702180 - 2703535 | 47800.7 |
| uracil phosphoribosyltransferase | SAMN02910411_0248 | Not Available | Positive | 2703640 - 2704278 | 23354.7 |
| hypothetical protein | SAMN02910411_0249 | Not Available | Positive | 2704290 - 2706566 | 88545.9 |
| flotillin | SAMN02910411_0250 | Not Available | Positive | 2706672 - 2708174 | 54059.6 |
| putative efflux protein, mate family | SAMN02910411_0251 | Not Available | Negative | 2708223 - 2709593 | 49764.3 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN02910411_0252 | Not Available | Negative | 2709624 - 2710511 | 33360.6 |
| small subunit ribosomal protein s10 | SAMN02910411_0253 | Not Available | Positive | 2711031 - 2711342 | 11636.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
