Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 2658600 - 2658676 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 2658694 - 2658766 | Not Available |
| hypothetical protein | SAMN02910411_0203 | Not Available | Negative | 2658935 - 2659369 | 16508.3 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | SAMN02910411_0204 | Not Available | Negative | 2659437 - 2661869 | 87581.6 |
| pp_02368 | SAMN02910411_0205 | Not Available | Negative | 2661899 - 2662966 | Not Available |
| putative hydrolases of hd superfamily | SAMN02910411_0206 | Not Available | Negative | 2662980 - 2663570 | 22376.3 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910411_0207 | Not Available | Positive | 2663749 - 2665194 | 55029.2 |
| hypothetical protein | SAMN02910411_0208 | Not Available | Positive | 2665215 - 2665610 | 15684.7 |
| methyl-accepting chemotaxis protein | SAMN02910411_0209 | Not Available | Negative | 2665659 - 2667368 | 61251.5 |
| protein of unknown function | SAMN02910411_0210 | Not Available | Negative | 2667526 - 2668626 | 40069.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
