Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910411_0181 | Not Available | Negative | 2638790 - 2638963 | 6977.03 |
| pseudouridine kinase | SAMN02910411_0182 | Not Available | Negative | 2639009 - 2639929 | 33242.6 |
| gtpase, g3e family | SAMN02910411_0183 | Not Available | Positive | 2640064 - 2641002 | 35431.9 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN02910411_0184 | Not Available | Negative | 2640999 - 2642240 | 44381.6 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN02910411_0185 | Not Available | Negative | 2642251 - 2642745 | 17981.6 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN02910411_0186 | Not Available | Negative | 2642861 - 2644108 | 44689.8 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN02910411_0187 | Not Available | Negative | 2644111 - 2644584 | 17327.7 |
| inner membrane protein | SAMN02910411_0188 | Not Available | Positive | 2644727 - 2645239 | 19384.6 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN02910411_0189 | Not Available | Negative | 2645252 - 2646442 | 45528.8 |
| alanine racemase | SAMN02910411_0190 | Not Available | Negative | 2646457 - 2647626 | 42998.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
