Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease j | SAMN02910411_0831 | Not Available | Negative | 235140 - 236816 | 61574.2 |
| protein of unknown function | SAMN02910411_0832 | Not Available | Negative | 236842 - 237105 | 9681.96 |
| putative holliday junction resolvase | SAMN02910411_0833 | Not Available | Negative | 237114 - 237545 | 16403.8 |
| uncharacterized protein, upf0297 family | SAMN02910411_0834 | Not Available | Negative | 237545 - 237811 | 10085.0 |
| threonylcarbamoyladenosine trna methylthiotransferase mtab | SAMN02910411_0835 | Not Available | Negative | 237880 - 239202 | 49226.8 |
| pts hpr component phosphorylation site | SAMN02910411_0836 | Not Available | Positive | 239314 - 239544 | 8493.17 |
| thiamine biosynthesis protein thii | SAMN02910411_0837 | Not Available | Negative | 239605 - 240786 | 44091.4 |
| cysteine desulfurase | SAMN02910411_0838 | Not Available | Negative | 240810 - 241958 | 41689.6 |
| 16s rrna (uracil1498-n3)-methyltransferase | SAMN02910411_0839 | Not Available | Negative | 241955 - 242695 | 27644.8 |
| ribosomal protein l11 methyltransferase | SAMN02910411_0840 | Not Available | Negative | 242700 - 243656 | 35548.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
