Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| germination protein m | SAMN02910411_0109 | Not Available | Negative | 2559273 - 2560262 | 36062.5 |
| signal transduction histidine kinase | SAMN02910411_0110 | Not Available | Negative | 2560262 - 2561698 | 53879.8 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN02910411_0111 | Not Available | Negative | 2561711 - 2562409 | 26491.1 |
| competence protein comea | SAMN02910411_0112 | Not Available | Negative | 2562431 - 2563003 | 20493.9 |
| hypothetical protein | SAMN02910411_0113 | Not Available | Positive | 2563184 - 2563381 | 7520.62 |
| dna-entry nuclease | SAMN02910411_0114 | Not Available | Negative | 2563374 - 2564051 | 25236.3 |
| sprt-like family protein | SAMN02910411_0115 | Not Available | Positive | 2564148 - 2564660 | 19624.6 |
| hypothetical protein | SAMN02910411_0116 | Not Available | Negative | 2564723 - 2564944 | 8413.82 |
| alpha-galactosidase | SAMN02910411_0117 | Not Available | Negative | 2565015 - 2567123 | 80318.5 |
| acetylornithine/n-succinyldiaminopimelate aminotransferase | SAMN02910411_0118 | Not Available | Negative | 2567196 - 2568395 | 44294.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
