Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910411_0099 | Not Available | Negative | 2546553 - 2547368 | 31024.7 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910411_0100 | Not Available | Positive | 2547528 - 2549297 | 64960.2 |
| dna polymerase iii, delta subunit | SAMN02910411_0101 | Not Available | Negative | 2549336 - 2550316 | 36999.7 |
| putative pyruvate formate lyase activating enzyme | SAMN02910411_0102 | Not Available | Negative | 2550385 - 2551296 | 34391.2 |
| threonyl-trna synthetase | SAMN02910411_0103 | Not Available | Negative | 2551344 - 2553113 | 67821.6 |
| hypothetical protein | SAMN02910411_0104 | Not Available | Negative | 2553476 - 2553751 | 10901.2 |
| 8-oxo-dgtp diphosphatase | SAMN02910411_0105 | Not Available | Negative | 2553860 - 2554330 | 17946.4 |
| uncharacterized conserved protein yect, duf1311 family | SAMN02910411_0106 | Not Available | Negative | 2554338 - 2555417 | 41026.9 |
| hypothetical protein | SAMN02910411_0107 | Not Available | Negative | 2555534 - 2556325 | 30956.8 |
| competence protein comec | SAMN02910411_0108 | Not Available | Negative | 2556938 - 2559253 | 84936.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
