Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMN02910411_0029 | Not Available | Negative | 2476305 - 2477453 | 41989.9 |
| phosphatidate cytidylyltransferase | SAMN02910411_0030 | Not Available | Negative | 2477466 - 2478269 | 29628.7 |
| undecaprenyl diphosphate synthase | SAMN02910411_0031 | Not Available | Negative | 2478282 - 2478980 | 26529.6 |
| ribosome recycling factor | SAMN02910411_0032 | Not Available | Negative | 2479045 - 2479599 | 21019.2 |
| uridylate kinase | SAMN02910411_0033 | Not Available | Negative | 2479599 - 2480303 | 25650.0 |
| protein ccma, bactofilin family | SAMN02910411_0034 | Not Available | Negative | 2480324 - 2481100 | 26947.5 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN02910411_0035 | Not Available | Negative | 2481121 - 2482035 | 34349.4 |
| elongation factor ts | SAMN02910411_0036 | Not Available | Negative | 2482164 - 2483087 | 33444.0 |
| small subunit ribosomal protein s2 | SAMN02910411_0037 | Not Available | Negative | 2483090 - 2483821 | 27150.8 |
| hypothetical protein | SAMN02910411_0038 | Not Available | Negative | 2483980 - 2484534 | 20462.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
