Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l35 | SAMN02910411_0019 | Not Available | Negative | 2462123 - 2462320 | 7559.62 |
| translation initiation factor if-3 | SAMN02910411_0020 | Not Available | Negative | 2462339 - 2462899 | 20982.6 |
| hypothetical protein | SAMN02910411_0021 | Not Available | Negative | 2463040 - 2463861 | 30258.8 |
| polyphosphate kinase | SAMN02910411_0022 | Not Available | Negative | 2463863 - 2466019 | 81935.0 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN02910411_0023 | Not Available | Negative | 2466037 - 2467551 | 57455.7 |
| chorismate mutase / prephenate dehydratase | SAMN02910411_0024 | Not Available | Negative | 2467570 - 2468706 | 43099.2 |
| protein of unknown function | SAMN02910411_0025 | Not Available | Negative | 2468722 - 2469735 | 37728.2 |
| dna polymerase-3 subunit alpha | SAMN02910411_0026 | Not Available | Negative | 2469755 - 2474200 | 167570.0 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN02910411_0027 | Not Available | Negative | 2474205 - 2475257 | 37306.7 |
| regulator of sigma e protease | SAMN02910411_0028 | Not Available | Negative | 2475268 - 2476302 | 38230.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
