Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine or glycine:cation symporter, agcs family | SAMN02910411_2842 | Not Available | Positive | 2444541 - 2446073 | 55664.2 |
| transposase | SAMN02910411_2843 | Not Available | Positive | 2446173 - 2446469 | 11586.8 |
| integrase core domain-containing protein | SAMN02910411_0001 | Not Available | Positive | 2446470 - 2446750 | 11166.2 |
| hypothetical protein | SAMN02910411_0002 | Not Available | Negative | 2446808 - 2447044 | 8382.38 |
| small subunit ribosomal protein s16 | SAMN02910411_0003 | Not Available | Negative | 2447068 - 2447310 | 8876.76 |
| signal recognition particle subunit ffh/srp54 (srp54) | SAMN02910411_0004 | Not Available | Negative | 2447350 - 2448690 | 48435.6 |
| hypothetical protein | SAMN02910411_0005 | Not Available | Negative | 2448694 - 2449029 | 12864.3 |
| threonine dehydratase | SAMN02910411_0006 | Not Available | Negative | 2449112 - 2450323 | 43770.8 |
| fused signal recognition particle receptor | SAMN02910411_0007 | Not Available | Negative | 2450350 - 2451279 | 34011.6 |
| condensin subunit smc | SAMN02910411_0008 | Not Available | Negative | 2451298 - 2454858 | 134108.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
