Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, sensor histidine kinase yesm | SAMN02910411_2832 | Not Available | Positive | 2433255 - 2434703 | 55117.3 |
| simple sugar transport system substrate-binding protein | SAMN02910411_2833 | Not Available | Positive | 2434696 - 2435715 | 37439.2 |
| gntr family transcriptional regulator, arabinose operon transcriptional repressor | SAMN02910411_2834 | Not Available | Negative | 2435712 - 2436680 | 36087.1 |
| simple sugar transport system substrate-binding protein | SAMN02910411_2835 | Not Available | Positive | 2437028 - 2438137 | 39309.1 |
| simple sugar transport system atp-binding protein | SAMN02910411_2836 | Not Available | Positive | 2438205 - 2439719 | 55390.3 |
| simple sugar transport system permease protein | SAMN02910411_2837 | Not Available | Positive | 2439719 - 2440765 | 36539.3 |
| simple sugar transport system permease protein | SAMN02910411_2838 | Not Available | Positive | 2440765 - 2441796 | 36829.8 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910411_2839 | Not Available | Positive | 2441948 - 2443237 | 48475.5 |
| catechol 2,3-dioxygenase | SAMN02910411_2840 | Not Available | Positive | 2443739 - 2444101 | 14132.0 |
| hypothetical protein | SAMN02910411_2841 | Not Available | Positive | 2444202 - 2444381 | 6854.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
