Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative efflux protein, mate family | SAMN02910411_2812 | Not Available | Positive | 2407972 - 2409300 | 47234.7 |
| protein of unknown function | SAMN02910411_2813 | Not Available | Positive | 2409434 - 2409784 | 12886.6 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN02910411_2814 | Not Available | Negative | 2409797 - 2411008 | 46080.8 |
| nanornase/pap phosphatase, hydrolyzes c-di-amp and oligornas | SAMN02910411_2815 | Not Available | Positive | 2411256 - 2412791 | 57903.1 |
| hypothetical protein | SAMN02910411_2816 | Not Available | Negative | 2412890 - 2413252 | 13180.5 |
| oligoendopeptidase f | SAMN02910411_2817 | Not Available | Positive | 2413386 - 2415182 | 68375.8 |
| dna polymerase-3 subunit alpha | SAMN02910411_2818 | Not Available | Positive | 2415183 - 2418689 | 131700.0 |
| 6-phosphofructokinase | SAMN02910411_2819 | Not Available | Positive | 2418791 - 2419777 | 35425.5 |
| rna methyltransferase, trmh family | SAMN02910411_2820 | Not Available | Positive | 2419761 - 2420567 | 29135.3 |
| parb-like nuclease domain-containing protein | SAMN02910411_2821 | Not Available | Positive | 2420706 - 2421587 | 34096.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
