Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinol monooxygenase ygin | SAMN02910411_2729 | Not Available | Positive | 2319236 - 2319562 | 12476.7 |
| transcriptional regulator, tetr family | SAMN02910411_2730 | Not Available | Positive | 2319573 - 2320193 | 24302.3 |
| hypothetical protein | SAMN02910411_2731 | Not Available | Positive | 2320249 - 2321136 | 32388.8 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN02910411_2732 | Not Available | Positive | 2321236 - 2322447 | 45152.4 |
| protein of unknown function | SAMN02910411_2733 | Not Available | Positive | 2322469 - 2322888 | 15268.3 |
| d-alanyl-d-alanine carboxypeptidase | SAMN02910411_2734 | Not Available | Positive | 2322899 - 2323735 | 31075.8 |
| hypothetical protein | SAMN02910411_2736 | Not Available | Negative | 2324053 - 2325555 | 56855.4 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN02910411_2737 | Not Available | Negative | 2325555 - 2327018 | 54951.8 |
| rhamnosyltransferase | SAMN02910411_2738 | Not Available | Negative | 2327040 - 2327972 | 35716.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN02910411_2739 | Not Available | Positive | 2328091 - 2329071 | 36876.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
