Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| raffinose/stachyose/melibiose transport system substrate-binding protein | SAMN02910411_2696 | Not Available | Positive | 2283724 - 2285016 | 46656.8 |
| raffinose/stachyose/melibiose transport system permease protein | SAMN02910411_2697 | Not Available | Positive | 2285084 - 2286142 | 39022.8 |
| raffinose/stachyose/melibiose transport system permease protein | SAMN02910411_2698 | Not Available | Positive | 2286142 - 2287008 | 31910.5 |
| putative mn2+ efflux pump mntp | SAMN02910411_2699 | Not Available | Positive | 2287216 - 2287806 | 21412.0 |
| cation:h+ antiporter | SAMN02910411_2700 | Not Available | Positive | 2287821 - 2288807 | 34385.2 |
| zinc-ribbon domain-containing protein | SAMN02910411_2701 | Not Available | Positive | 2288881 - 2289237 | 13228.9 |
| methionyl-trna synthetase | SAMN02910411_2702 | Not Available | Positive | 2289247 - 2291220 | 73538.8 |
| tatd dnase family protein | SAMN02910411_2703 | Not Available | Positive | 2291222 - 2292007 | 29965.6 |
| 16s rrna (adenine1518-n6/adenine1519-n6)-dimethyltransferase | SAMN02910411_2704 | Not Available | Positive | 2292010 - 2292864 | 31525.2 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910411_2705 | Not Available | Positive | 2292898 - 2294523 | 63218.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
