Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | SAMN02910411_2676 | Not Available | Positive | 2260915 - 2262300 | 53149.3 |
| dna polymerase-3 subunit beta | SAMN02910411_2677 | Not Available | Positive | 2262573 - 2263688 | 41432.2 |
| ribosome-associated protein | SAMN02910411_2678 | Not Available | Positive | 2263688 - 2263903 | 7928.5 |
| dna replication and repair protein recf | SAMN02910411_2679 | Not Available | Positive | 2263893 - 2264990 | 42193.8 |
| dna gyrase subunit b | SAMN02910411_2680 | Not Available | Positive | 2264987 - 2266915 | 71931.6 |
| dna gyrase subunit a | SAMN02910411_2681 | Not Available | Positive | 2266966 - 2269500 | 94645.3 |
| fumarate hydratase subunit alpha | SAMN02910411_2682 | Not Available | Positive | 2269616 - 2270458 | 30438.7 |
| fumarate hydratase subunit beta | SAMN02910411_2683 | Not Available | Positive | 2270458 - 2271012 | 20026.2 |
| oligopeptide transport system permease protein | SAMN02910411_2684 | Not Available | Positive | 2271071 - 2271982 | 33383.1 |
| oligopeptide transport system permease protein | SAMN02910411_2685 | Not Available | Positive | 2272010 - 2273068 | 38701.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
