Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine utilization protein rocb | SAMN02910411_2636 | Not Available | Negative | 2227989 - 2229623 | 62053.4 |
| amino acid abc transporter atp-binding protein, paat family (tc 3.a.1.3.-) | SAMN02910411_2637 | Not Available | Negative | 2229684 - 2230427 | 27489.7 |
| amino acid abc transporter membrane protein, paat family (tc 3.a.1.3.-) | SAMN02910411_2638 | Not Available | Negative | 2230417 - 2231148 | 27211.1 |
| polar amino acid transport system substrate-binding protein | SAMN02910411_2639 | Not Available | Negative | 2231151 - 2231924 | 27528.6 |
| hypothetical protein | SAMN02910411_2640 | Not Available | Negative | 2232123 - 2233112 | 39013.4 |
| small subunit ribosomal protein s18 | SAMN02910411_2641 | Not Available | Negative | 2233208 - 2233462 | 9770.16 |
| single-strand dna-binding protein | SAMN02910411_2642 | Not Available | Negative | 2233509 - 2233949 | 15844.3 |
| small subunit ribosomal protein s6 | SAMN02910411_2643 | Not Available | Negative | 2233974 - 2234264 | 11125.2 |
| nad-dependent deacetylase | SAMN02910411_2644 | Not Available | Negative | 2234423 - 2235181 | 28425.9 |
| hypothetical protein | SAMN02910411_2645 | Not Available | Negative | 2235205 - 2235663 | 16716.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
