Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose 1-epimerase | SAMN02910411_2595 | Not Available | Positive | 2187733 - 2188767 | 38375.6 |
| diaminopimelate dehydrogenase | SAMN02910411_2596 | Not Available | Positive | 2188894 - 2189871 | 35612.1 |
| galactokinase | SAMN02910411_2597 | Not Available | Negative | 2189999 - 2191168 | 42727.4 |
| hypothetical protein | SAMN02910411_2598 | Not Available | Negative | 2191187 - 2191714 | 19766.9 |
| beta-galactosidase | SAMN02910411_2599 | Not Available | Negative | 2191773 - 2194790 | 116024.0 |
| lactose/l-arabinose transport system permease protein | SAMN02910411_2600 | Not Available | Negative | 2194792 - 2195628 | 31380.2 |
| lactose/l-arabinose transport system permease protein | SAMN02910411_2601 | Not Available | Negative | 2195621 - 2196523 | 33441.8 |
| lactose/l-arabinose transport system substrate-binding protein | SAMN02910411_2602 | Not Available | Negative | 2196610 - 2197971 | 49225.1 |
| arac-type dna-binding protein | SAMN02910411_2603 | Not Available | Negative | 2198205 - 2199140 | 37089.4 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910411_2604 | Not Available | Negative | 2199149 - 2200519 | 52452.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
